BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H02SP1|AL429293
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1701 0.0
>3x_Contig1302
Length = 5215
Score = 1701 bits (856), Expect = 0.0
Identities = 885/893 (99%), Gaps = 3/893 (0%)
Strand = Plus / Plus
Query: 1 aattagaagaaggcaaagttaaaacaaaatgggacacgtttaagtcgatattcaagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aattagaagaaggcaaagttaaaacaaaatgggacacgtttaagtcgatattcaagaaaa 495
Query: 61 ccaaaacttttaacatgaatagcggcgtatcgttcgattccagaatgatcatttcccgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ccaaaacttttaacatgaatagcggcgtatcgttcgattccagaatgatcatttcccgag 555
Query: 121 attttgtattgaatgtggatgaacatgcagaatccccacgtttcggagacgttcaagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 attttgtattgaatgtggatgaacatgcagaatccccacgtttcggagacgttcaagaac 615
Query: 181 catttgaaagttatgtcagtgatttgaaaccaacaagatcaataaaacacaaatatcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 catttgaaagttatgtcagtgatttgaaaccaacaagatcaataaaacacaaatatcaag 675
Query: 241 tgatatccctggttagcagaaaattccaattgaatacaccgaagtttgaagatatgggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgatatccctggttagcagaaaattccaattgaatacaccgaagtttgaagatatgggga 735
Query: 301 agggctcgttcgcctttttttgggagcdattcaagaacaactttacatgataaagctttg 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 736 agggctcgttcgcctttttttgggagcaattcaagaacaactttacatgataaagctttg 795
Query: 361 ttccaacttttgaccctttttaatctccggatttttataaatttgacattgacaatagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttccaacttttgaccctttttaatctccggatttttataaatttgacattgacaatagct 855
Query: 421 tttaatgattaaaggtctttaaaaaaataacaaaagtgaaagatgaccaaaaacggacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tttaatgattaaaggtctttaaaaaaataacaaaagtgaaagatgaccaaaaacggacag 915
Query: 481 agaacagaataatcataaaaccattatatatactatatgcgctccccctacattatacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 agaacagaataatcataaaaccattatatatactatatgcgctccccctacattatacat 975
Query: 541 tttcgacattgtcatccgacgttgttactagtagggagaaagatgctgtataataatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 tttcgacattgtcatccgacgttgttactagtagggagaaagatgctgtataataatata 1035
Query: 601 aaanagaatgttataacagtagatatagatgttaaaaagatactatgttagttgcaatcc 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 aaaaagaatgttataacagtagatatagatgttaaaaagatactatgttagttgcaatcc 1095
Query: 661 agcagaactagataaatatcgttaaaaactttcatcaattcatgatatgtgatcattaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 agcagaactagataaatatcgttaaaaactttcatcaattcatgatatgtgatcattaac 1155
Query: 721 taaaaggccgaagaaataatatgggataagagattggaaggaaggaaaaaaaaaagataa 780
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 taaaaggccgaaggaataatatgggataagagattggaaggaaggaaaaaaaaaagataa 1215
Query: 781 tatttttggcagtwactgttaaattataataacagactgatcttaccccaaatgacttat 840
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 tatttttggcagtaactg-taaattataataacagactgatcttaccccaaatgacttat 1274
Query: 841 ccgtctagttggaggtgtc-acaacgtatctmccc-aaatcttaccttgttcc 891
||||||||||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 1275 ccgtctagttggaggtgtcaacaacgtatctacccaaaatcttaccttgttcc 1327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9788
Number of Sequences: 1807
Number of extensions: 9788
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)